Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913497.1_cds_XP_016463539.1_56654
CDS Infomation

[gene=LOC107786561] [db_xref=GeneID:107786561] [protein=probable ubiquitin-like-specific protease 2B isoform X4] [protein_id=XP_016463539.1] [location=join(24430..24529,29188..29477,29570..29657,29754..29803,30435..30635,30726..30801,33912..34023,34611..34685,38376..38507,38765..38965,39046..39101,39178..39274,40565..40655,44557..44679,46363..46773,49297..49305)] [gbkey=CDS]
Sequence

ATGAAGAATCCTACGGACGTTTTTGAGTTCAAAGTTGAGGAGCAGCCTTCGGAAACCGAA
GCTAATAGGTTTTGCAGCAAGTATACATTCACCCAAAATGGTGCACGAGGAACCAATATA
AACTCGAAGGAGACTGGTGATGAACCTACTGTAGACATGGAAGCAGCTGACGGTGATTTC
AATGGTAAAAGTGCTCGCTCAACTCTGGATGCAGAAGATTGTAGTGATGAGAGAATGCTG
AGATTGGGTGGCATTCCAACAATTACTTCGACAAAACAAAGGCGATATCCTGATAGGGAA
CCTAACAATTGTATAGATGGAAGTTTCTTGGAAGGCAGTTCATATACTGGAACAGCTTTT
CAGGAGATTTTCCATGGATCTCCTTCCAAAGATGAATCAGTTGGCACAGATTCTGATGTT
GATGAAAGCAGAAGTGATGAATCAGCATCATACTCATCTGCCACCCGAGACAATTATGAC
ATCTTGGATGGACCATTATCAAATCATCAGTTTGACCAGTGGGGAATGTTTGAAAACAAG
CCAATTGTTTTCTGTCCTGATTATCTCTATTATCGAGGAACATCCTACGCAGTCACAGAC
ACTACAGTAACCTTTTCCAGTAATTGTGTTGAGGTCAAAGGCTCAACAATGAACGGGAAT
TCAGAGACATCTTGCATTCGCTTTGGAGTTGAAGACATATTCCAAATTCAATCTCATTTG
TCAGGGAGGTTTGACGTGGCTGTGTTTAAGATCCATGTAAATAAAAGATCAACAACACAA
AGTGAAAATGCTCACGAGAGTTCTGTGCTTAATGTCAAAGGTATTGAGGAGGTGGAGTTT
GCTGTTAATGATTTTGACTTGTCCGAGAAATGTGAAGCAATTCAATCTTTGGATGGCTAC
AAAGCAGTATGGAACTACAATGAGATTGAAGAATGGAGGGAGAATTCACATGGAGAAACA
TCAAATCAGCAATCTAAGAAATATTTTCCAAGTTACGGTGAGCCGCTTGAAGAAGTTTAT
TATCCTAAAGGAGATCCTGATGCTGTTTGCATTAGTAAAAGGGACTTTGATCTTCTGGCA
CCAGAAACATTTGTCAATGATACAATTATTGATTTCTACATACAGTATTTAAAGAATGGA
ATTCCACCAGAGAGGAGGCAACGATACCATTTCTTTAACTGTTTCTTTTTTCGAAAGTTG
GCTGACATGGATAAAGATCCAACCAGTGCATTTGATGGCCGTGCTGCTTTTTTGCGTGTC
CGTAAGTGGACAAGGAAAGTGGACTTATTTGATAAGGACTTTGTTTTCATTCCTGTAAAT
TACAATTATCACTGGAGTCTGATTGTCATATGCCATCCTGGTGAAGTGGCTAACTTTACA
GATGATGATACTGCAGTTGGCCCAGTCAAAGTACCATGTATATTGCACATGGATTCTTTT
AGAGGAAGTCATGTGGGTCTCAAAGATCTTCTGCAAAGCTACCTCTGGGAGGAATGGAAA
GAGAGGACAAAGGAAACGTCTGATGTTGTCTCCTCAAAATTTCGAAATTTGAGATTTCTC
TCTCTTGAGCTACCACAACAGCAAAATCTATCAGACTGTGGTCTCTTTTTACTACACTAT
GTGGAGCACTTTTTGGCGGAAGATCCTGCTTGTATCAGTCCATACAGGATAAAGAACTAC
CACAATGAATTTCTTAGCGTAAACTGGTTTCAACCTCATGAGCCTTCTATAAAGCGCAGT
GCAATTCAAAGACTAATCAGTAACCTCCTCAAGAACCTTTCTCTAGAAAATTCTCCCTCT
TGTGCGAGTGACAGTTGTTATCCTGAAGATGGTCTCAAGACAAGCAATTATGATGAAAAT
GCTGTAGAATTAGTATCTGAGCAATTTGGTTCATCAAAGAGTTCAGACAATTTACCATGT
TCTCAAGCTAATGAGATAAACCCATTTCCTACTTCCTCCCTCAGGGGTGTTTGTGCTAGT
GATTCAGGCCTTGTTTTGAACGAATCTTTTGAGCCTGAATCTGATGAAGAGTCATTGCTT
GACATGCGCTTTGGTCACTCAGCATCTTTTAACGAGTTTAGGAGTTCGTTGCCACCAATA
CAGGGTCTCTGA

Peptide Sequence

PEP ID

XP_016463539.1
PEP Infomation

PREDICTED: probable ubiquitin-like-specific protease 2B isoform X4 [Nicotiana tabacum]
Sequence

MKNPTDVFEFKVEEQPSETEANRFCSKYTFTQNGARGTNINSKETGDEPTVDMEAADGDF
NGKSARSTLDAEDCSDERMLRLGGIPTITSTKQRRYPDREPNNCIDGSFLEGSSYTGTAF
QEIFHGSPSKDESVGTDSDVDESRSDESASYSSATRDNYDILDGPLSNHQFDQWGMFENK
PIVFCPDYLYYRGTSYAVTDTTVTFSSNCVEVKGSTMNGNSETSCIRFGVEDIFQIQSHL
SGRFDVAVFKIHVNKRSTTQSENAHESSVLNVKGIEEVEFAVNDFDLSEKCEAIQSLDGY
KAVWNYNEIEEWRENSHGETSNQQSKKYFPSYGEPLEEVYYPKGDPDAVCISKRDFDLLA
PETFVNDTIIDFYIQYLKNGIPPERRQRYHFFNCFFFRKLADMDKDPTSAFDGRAAFLRV
RKWTRKVDLFDKDFVFIPVNYNYHWSLIVICHPGEVANFTDDDTAVGPVKVPCILHMDSF
RGSHVGLKDLLQSYLWEEWKERTKETSDVVSSKFRNLRFLSLELPQQQNLSDCGLFLLHY
VEHFLAEDPACISPYRIKNYHNEFLSVNWFQPHEPSIKRSAIQRLISNLLKNLSLENSPS
CASDSCYPEDGLKTSNYDENAVELVSEQFGSSKSSDNLPCSQANEINPFPTSSLRGVCAS
DSGLVLNESFEPESDEESLLDMRFGHSASFNEFRSSLPPIQGL

Transcript Sequence

Gene sequence data has not been registered.